Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

Jennifer R. S. Meadows; Jeffrey M. Kidd; Guo-Dong Wang; Heidi G. Parker; Peter Z. Schall; Matteo Bianchi; Matthew J. Christmas; Katia Bougiouri; Reuben M. Buckley; Christophe Hitte; Anthony K. Nguyen; Chao Wang; Vidhya Jagannathan; Julia E. Niskanen; Laurent A. F. Frantz; Meharji Arumilli; Sruthi Hundi; Kerstin Lindblad-Toh; Catarina Ginja; Kadek Karang Agustina; Catherine Andre; Adam R. Boyko; Brian W. Davis; Michaela Droegemueller; Xin-Yao Feng; Konstantinos Gkagkavouzis; Giorgos Iliopoulos; Alexander C. Harris; Marjo K. Hytönen; Daniela C. Kalthoff; Yan-Hu Liu; Petros Lymberakis; Nikolaos Poulakakis; Ana Elisabete Pires; Fernando Racimo; Fabian Ramos-Almodovar; Peter Savolainen; Semina Venetsani; Imke Tammen; Alexandros Triantafyllidis; Bridgett vonHoldt; Robert K. Wayne; Greger Larson; Frank W. Nicholas; Hannes Lohi; Tosso Leeb; Ya-Ping Zhang; Elaine A. Ostrander

doi:10.1186/s13059-023-03023-7

Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

Jennifer R. S. Meadows
, Jeffrey M. Kidd
, Guo-Dong Wang
, Heidi G. Parker
, Peter Z. Schall
, Matteo Bianchi
, Matthew J. Christmas
, Katia Bougiouri
, Reuben M. Buckley
, Christophe Hitte
, Anthony K. Nguyen
, Chao Wang
, Vidhya Jagannathan
, Julia E. Niskanen
, Laurent A. F. Frantz
, Meharji Arumilli
, Sruthi Hundi
, Kerstin Lindblad-Toh
, Catarina Ginja
, Kadek Karang Agustina

Catherine Andre, Adam R. Boyko, Brian W. Davis, Michaela Droegemueller, Xin-Yao Feng, Konstantinos Gkagkavouzis, Giorgos Iliopoulos, Alexander C. Harris, Marjo K. Hytönen, Daniela C. Kalthoff, Yan-Hu Liu, Petros Lymberakis, Nikolaos Poulakakis, Ana Elisabete Pires, Fernando Racimo, Fabian Ramos-Almodovar, Peter Savolainen, Semina Venetsani, Imke Tammen, Alexandros Triantafyllidis, Bridgett vonHoldt, Robert K. Wayne, Greger Larson, Frank W. Nicholas, Hannes Lohi, Tosso Leeb, Ya-Ping Zhang, Elaine A. Ostrander

Research output: Contribution to journal › Article › Scientific › peer-review

Original language	English
Journal	Genome Biology
Volume	24
Issue number	1
Number of pages	41
ISSN	1474-760X
DOIs	https://doi.org/10.1186/s13059-023-03023-7
Publication status	Published - 15 Aug 2023
MoE publication type	A1 Journal article-refereed

Fields of Science

Canine
Demographic history
Dog
Genetic diversity
Genomics
Mitochondrial DNA
Variation
1184 Genetics, developmental biology, physiology
318 Medical biotechnology
413 Veterinary science

Access to Document

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s13059-023-03023-7Final published version, 4.67 MBLicence: CC BY
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Cite this

Meadows, J. R. S., Kidd, J. M., Wang, G.-D., Parker, H. G., Schall, P. Z., Bianchi, M., Christmas, M. J., Bougiouri, K., Buckley, R. M., Hitte, C., Nguyen, A. K., Wang, C., Jagannathan, V., Niskanen, J. E., Frantz, L. A. F., Arumilli, M., Hundi, S., Lindblad-Toh, K., Ginja, C., ... Ostrander, E. A. (2023). Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome Biology, 24(1). https://doi.org/10.1186/s13059-023-03023-7

@article{a6c9ebe838d34ca89a5641176d3e1e57,

title = "Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture",

keywords = "Canine, Demographic history, Dog, Genetic diversity, Genomics, Mitochondrial DNA, Variation, 1184 Genetics, developmental biology, physiology, 318 Medical biotechnology, 413 Veterinary science",

author = "Meadows, \{Jennifer R. S.\} and Kidd, \{Jeffrey M.\} and Guo-Dong Wang and Parker, \{Heidi G.\} and Schall, \{Peter Z.\} and Matteo Bianchi and Christmas, \{Matthew J.\} and Katia Bougiouri and Buckley, \{Reuben M.\} and Christophe Hitte and Nguyen, \{Anthony K.\} and Chao Wang and Vidhya Jagannathan and Niskanen, \{Julia E.\} and Frantz, \{Laurent A. F.\} and Meharji Arumilli and Sruthi Hundi and Kerstin Lindblad-Toh and Catarina Ginja and Agustina, \{Kadek Karang\} and Catherine Andre and Boyko, \{Adam R.\} and Davis, \{Brian W.\} and Michaela Droegemueller and Xin-Yao Feng and Konstantinos Gkagkavouzis and Giorgos Iliopoulos and Harris, \{Alexander C.\} and Hyt{\"o}nen, \{Marjo K.\} and Kalthoff, \{Daniela C.\} and Yan-Hu Liu and Petros Lymberakis and Nikolaos Poulakakis and Pires, \{Ana Elisabete\} and Fernando Racimo and Fabian Ramos-Almodovar and Peter Savolainen and Semina Venetsani and Imke Tammen and Alexandros Triantafyllidis and Bridgett vonHoldt and Wayne, \{Robert K.\} and Greger Larson and Nicholas, \{Frank W.\} and Hannes Lohi and Tosso Leeb and Ya-Ping Zhang and Ostrander, \{Elaine A.\}",

year = "2023",

month = aug,

day = "15",

doi = "10.1186/s13059-023-03023-7",

language = "English",

volume = "24",

journal = "Genome Biology",

issn = "1474-760X",

publisher = "BioMed Central Ltd",

number = "1",

}

Meadows, JRS, Kidd, JM, Wang, G-D, Parker, HG, Schall, PZ, Bianchi, M, Christmas, MJ, Bougiouri, K, Buckley, RM, Hitte, C, Nguyen, AK, Wang, C, Jagannathan, V, Niskanen, JE, Frantz, LAF, Arumilli, M , Hundi, S, Lindblad-Toh, K, Ginja, C, Agustina, KK, Andre, C, Boyko, AR, Davis, BW, Droegemueller, M, Feng, X-Y, Gkagkavouzis, K, Iliopoulos, G, Harris, AC, Hytönen, MK, Kalthoff, DC, Liu, Y-H, Lymberakis, P, Poulakakis, N, Pires, AE, Racimo, F, Ramos-Almodovar, F, Savolainen, P, Venetsani, S, Tammen, I, Triantafyllidis, A, vonHoldt, B, Wayne, RK, Larson, G, Nicholas, FW, Lohi, H, Leeb, T, Zhang, Y-P & Ostrander, EA 2023, 'Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture', Genome Biology, vol. 24, no. 1. https://doi.org/10.1186/s13059-023-03023-7

TY - JOUR

T1 - Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

AU - Meadows, Jennifer R. S.

AU - Kidd, Jeffrey M.

AU - Wang, Guo-Dong

AU - Parker, Heidi G.

AU - Schall, Peter Z.

AU - Bianchi, Matteo

AU - Christmas, Matthew J.

AU - Bougiouri, Katia

AU - Buckley, Reuben M.

AU - Hitte, Christophe

AU - Nguyen, Anthony K.

AU - Wang, Chao

AU - Jagannathan, Vidhya

AU - Niskanen, Julia E.

AU - Frantz, Laurent A. F.

AU - Arumilli, Meharji

AU - Hundi, Sruthi

AU - Lindblad-Toh, Kerstin

AU - Ginja, Catarina

AU - Agustina, Kadek Karang

AU - Andre, Catherine

AU - Boyko, Adam R.

AU - Davis, Brian W.

AU - Droegemueller, Michaela

AU - Feng, Xin-Yao

AU - Gkagkavouzis, Konstantinos

AU - Iliopoulos, Giorgos

AU - Harris, Alexander C.

AU - Hytönen, Marjo K.

AU - Kalthoff, Daniela C.

AU - Liu, Yan-Hu

AU - Lymberakis, Petros

AU - Poulakakis, Nikolaos

AU - Pires, Ana Elisabete

AU - Racimo, Fernando

AU - Ramos-Almodovar, Fabian

AU - Savolainen, Peter

AU - Venetsani, Semina

AU - Tammen, Imke

AU - Triantafyllidis, Alexandros

AU - vonHoldt, Bridgett

AU - Wayne, Robert K.

AU - Larson, Greger

AU - Nicholas, Frank W.

AU - Lohi, Hannes

AU - Leeb, Tosso

AU - Zhang, Ya-Ping

AU - Ostrander, Elaine A.

PY - 2023/8/15

Y1 - 2023/8/15

KW - Canine

KW - Demographic history

KW - Dog

KW - Genetic diversity

KW - Genomics

KW - Mitochondrial DNA

KW - Variation

KW - 1184 Genetics, developmental biology, physiology

KW - 318 Medical biotechnology

KW - 413 Veterinary science

U2 - 10.1186/s13059-023-03023-7

DO - 10.1186/s13059-023-03023-7

M3 - Article

C2 - 37582787

SN - 1474-760X

VL - 24

JO - Genome Biology

JF - Genome Biology

IS - 1

ER -