Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays

Antti Honkela, Jaakko Peltonen, Hande Topa, Iryna Charapitsa, Filomena Matarese, Korbinian Grote, Hendrik G. Stunnenberg, George Reid, Neil D. Lawrence, Magnus Rattray

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
JournalProceedings of the National Academy of Sciences of the United States of America
Volume112
Issue number42
Pages (from-to)13115-13120
Number of pages6
ISSN0027-8424
DOIs
Publication statusPublished - 20 Oct 2015
MoE publication typeA1 Journal article-refereed

Fields of Science

  • gene expression
  • gene transcription
  • RNA processing
  • Gaussian process inference
  • RNA splicing
  • INDUCED GENE-EXPRESSION
  • MESSENGER-RNA
  • TEMPORAL-ORDER
  • TIME
  • PATHWAYS
  • DYNAMICS
  • CELLS
  • 113 Computer and information sciences

Cite this

Honkela, Antti ; Peltonen, Jaakko ; Topa, Hande ; Charapitsa, Iryna ; Matarese, Filomena ; Grote, Korbinian ; Stunnenberg, Hendrik G. ; Reid, George ; Lawrence, Neil D. ; Rattray, Magnus. / Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays. In: Proceedings of the National Academy of Sciences of the United States of America. 2015 ; Vol. 112, No. 42. pp. 13115-13120.
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author = "Antti Honkela and Jaakko Peltonen and Hande Topa and Iryna Charapitsa and Filomena Matarese and Korbinian Grote and Stunnenberg, {Hendrik G.} and George Reid and Lawrence, {Neil D.} and Magnus Rattray",
year = "2015",
month = "10",
day = "20",
doi = "10.1073/pnas.1420404112",
language = "English",
volume = "112",
pages = "13115--13120",
journal = "Proceedings of the National Academy of Sciences of the United States of America",
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Honkela, A, Peltonen, J, Topa, H, Charapitsa, I, Matarese, F, Grote, K, Stunnenberg, HG, Reid, G, Lawrence, ND & Rattray, M 2015, 'Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays', Proceedings of the National Academy of Sciences of the United States of America, vol. 112, no. 42, pp. 13115-13120. https://doi.org/10.1073/pnas.1420404112

Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays. / Honkela, Antti; Peltonen, Jaakko; Topa, Hande; Charapitsa, Iryna; Matarese, Filomena; Grote, Korbinian; Stunnenberg, Hendrik G.; Reid, George; Lawrence, Neil D.; Rattray, Magnus.

In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, No. 42, 20.10.2015, p. 13115-13120.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays

AU - Honkela, Antti

AU - Peltonen, Jaakko

AU - Topa, Hande

AU - Charapitsa, Iryna

AU - Matarese, Filomena

AU - Grote, Korbinian

AU - Stunnenberg, Hendrik G.

AU - Reid, George

AU - Lawrence, Neil D.

AU - Rattray, Magnus

PY - 2015/10/20

Y1 - 2015/10/20

KW - gene expression

KW - gene transcription

KW - RNA processing

KW - Gaussian process inference

KW - RNA splicing

KW - INDUCED GENE-EXPRESSION

KW - MESSENGER-RNA

KW - TEMPORAL-ORDER

KW - TIME

KW - PATHWAYS

KW - DYNAMICS

KW - CELLS

KW - 113 Computer and information sciences

U2 - 10.1073/pnas.1420404112

DO - 10.1073/pnas.1420404112

M3 - Article

VL - 112

SP - 13115

EP - 13120

JO - Proceedings of the National Academy of Sciences of the United States of America

JF - Proceedings of the National Academy of Sciences of the United States of America

SN - 0027-8424

IS - 42

ER -