Identifying differentially methylated sites in samples with varying tumor purity

Antti Häkkinen, Amjad Alkodsi, Chiara Facciotto, Kaiyang Zhang, Katja Kaipio, Sirpa Leppa, Olli Carpen, Seija Grenman, Johanna Hynninen, Sakari Hietanen, Rainer Lehtonen, Sampsa Hautaniemi

Research output: Contribution to journal › Article › Scientific › peer-review

Original languageEnglish
JournalBioinformatics
Volume34
Issue number18
Pages (from-to)3078-3085
Number of pages8
ISSN1367-4803
DOIs
Publication statusPublished - 15 Sep 2018
MoE publication typeA1 Journal article-refereed

Fields of Science

  • DNA METHYLATION
  • OVARIAN-CANCER
  • EPIGENOME
  • GENOME
  • 3111 Biomedicine
  • 1182 Biochemistry, cell and molecular biology
  • 111 Mathematics

Cite this

Häkkinen, Antti ; Alkodsi, Amjad ; Facciotto, Chiara ; Zhang, Kaiyang ; Kaipio, Katja ; Leppa, Sirpa ; Carpen, Olli ; Grenman, Seija ; Hynninen, Johanna ; Hietanen, Sakari ; Lehtonen, Rainer ; Hautaniemi, Sampsa. / Identifying differentially methylated sites in samples with varying tumor purity. In: Bioinformatics. 2018 ; Vol. 34, No. 18. pp. 3078-3085.
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title = "Identifying differentially methylated sites in samples with varying tumor purity",
keywords = "DNA METHYLATION, OVARIAN-CANCER, EPIGENOME, GENOME, 3111 Biomedicine, 1182 Biochemistry, cell and molecular biology, 111 Mathematics",
author = "Antti H{\"a}kkinen and Amjad Alkodsi and Chiara Facciotto and Kaiyang Zhang and Katja Kaipio and Sirpa Leppa and Olli Carpen and Seija Grenman and Johanna Hynninen and Sakari Hietanen and Rainer Lehtonen and Sampsa Hautaniemi",
year = "2018",
month = "9",
day = "15",
doi = "10.1093/bioinformatics/bty310",
language = "English",
volume = "34",
pages = "3078--3085",
journal = "Bioinformatics",
issn = "1367-4803",
publisher = "Oxford University Press",
number = "18",

}

Häkkinen, A, Alkodsi, A, Facciotto, C, Zhang, K, Kaipio, K, Leppa, S, Carpen, O, Grenman, S, Hynninen, J, Hietanen, S, Lehtonen, R & Hautaniemi, S 2018, 'Identifying differentially methylated sites in samples with varying tumor purity', Bioinformatics, vol. 34, no. 18, pp. 3078-3085. https://doi.org/10.1093/bioinformatics/bty310

Identifying differentially methylated sites in samples with varying tumor purity. / Häkkinen, Antti; Alkodsi, Amjad; Facciotto, Chiara; Zhang, Kaiyang; Kaipio, Katja; Leppa, Sirpa; Carpen, Olli; Grenman, Seija; Hynninen, Johanna; Hietanen, Sakari; Lehtonen, Rainer; Hautaniemi, Sampsa.

In: Bioinformatics, Vol. 34, No. 18, 15.09.2018, p. 3078-3085.

Research output: Contribution to journal › Article › Scientific › peer-review

TY - JOUR

T1 - Identifying differentially methylated sites in samples with varying tumor purity

AU - Häkkinen, Antti

AU - Alkodsi, Amjad

AU - Facciotto, Chiara

AU - Zhang, Kaiyang

AU - Kaipio, Katja

AU - Leppa, Sirpa

AU - Carpen, Olli

AU - Grenman, Seija

AU - Hynninen, Johanna

AU - Hietanen, Sakari

AU - Lehtonen, Rainer

AU - Hautaniemi, Sampsa

PY - 2018/9/15

Y1 - 2018/9/15

KW - DNA METHYLATION

KW - OVARIAN-CANCER

KW - EPIGENOME

KW - GENOME

KW - 3111 Biomedicine

KW - 1182 Biochemistry, cell and molecular biology

KW - 111 Mathematics

U2 - 10.1093/bioinformatics/bty310

DO - 10.1093/bioinformatics/bty310

M3 - Article

VL - 34

SP - 3078

EP - 3085

JO - Bioinformatics

JF - Bioinformatics

SN - 1367-4803

IS - 18

ER -

Häkkinen A, Alkodsi A, Facciotto C, Zhang K, Kaipio K, Leppa S et al. Identifying differentially methylated sites in samples with varying tumor purity. Bioinformatics. 2018 Sep 15;34(18):3078-3085. https://doi.org/10.1093/bioinformatics/bty310

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