Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies

Sudarshan A. Shetty, Floor Hugenholtz, Leo Lahti, Hauke Smidt, Willem M. de Vos

Research output: Contribution to journalReview ArticleScientificpeer-review

Original languageEnglish
JournalFEMS Microbiology Reviews
Volume41
Issue number2
Pages (from-to)182-199
Number of pages18
ISSN0168-6445
DOIs
Publication statusPublished - Mar 2017
MoE publication typeA2 Review article in a scientific journal

Fields of Science

  • alternative stable states
  • bistability
  • core microbiota
  • early warning signals
  • landscape model
  • tipping elements
  • HUMAN GUT MICROBIOME
  • INFLAMMATORY-BOWEL-DISEASE
  • PHYLOGENETIC MICROARRAY
  • FECAL MICROBIOTA
  • AKKERMANSIA-MUCINIPHILA
  • GASTROINTESTINAL-TRACT
  • ULCERATIVE-COLITIS
  • IN-VITRO
  • BACTERIA
  • DIVERSITY
  • 1183 Plant biology, microbiology, virology
  • 3111 Biomedicine

Cite this

Shetty, Sudarshan A. ; Hugenholtz, Floor ; Lahti, Leo ; Smidt, Hauke ; de Vos, Willem M. / Intestinal microbiome landscaping : insight in community assemblage and implications for microbial modulation strategies. In: FEMS Microbiology Reviews. 2017 ; Vol. 41, No. 2. pp. 182-199.
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keywords = "alternative stable states, bistability, core microbiota, early warning signals, landscape model, tipping elements, HUMAN GUT MICROBIOME, INFLAMMATORY-BOWEL-DISEASE, PHYLOGENETIC MICROARRAY, FECAL MICROBIOTA, AKKERMANSIA-MUCINIPHILA, GASTROINTESTINAL-TRACT, ULCERATIVE-COLITIS, IN-VITRO, BACTERIA, DIVERSITY, 1183 Plant biology, microbiology, virology, 3111 Biomedicine",
author = "Shetty, {Sudarshan A.} and Floor Hugenholtz and Leo Lahti and Hauke Smidt and {de Vos}, {Willem M.}",
year = "2017",
month = "3",
doi = "10.1093/femsre/fuw045",
language = "English",
volume = "41",
pages = "182--199",
journal = "FEMS Microbiology Reviews",
issn = "0168-6445",
publisher = "Oxford University Press",
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Intestinal microbiome landscaping : insight in community assemblage and implications for microbial modulation strategies. / Shetty, Sudarshan A.; Hugenholtz, Floor; Lahti, Leo; Smidt, Hauke; de Vos, Willem M.

In: FEMS Microbiology Reviews, Vol. 41, No. 2, 03.2017, p. 182-199.

Research output: Contribution to journalReview ArticleScientificpeer-review

TY - JOUR

T1 - Intestinal microbiome landscaping

T2 - insight in community assemblage and implications for microbial modulation strategies

AU - Shetty, Sudarshan A.

AU - Hugenholtz, Floor

AU - Lahti, Leo

AU - Smidt, Hauke

AU - de Vos, Willem M.

PY - 2017/3

Y1 - 2017/3

KW - alternative stable states

KW - bistability

KW - core microbiota

KW - early warning signals

KW - landscape model

KW - tipping elements

KW - HUMAN GUT MICROBIOME

KW - INFLAMMATORY-BOWEL-DISEASE

KW - PHYLOGENETIC MICROARRAY

KW - FECAL MICROBIOTA

KW - AKKERMANSIA-MUCINIPHILA

KW - GASTROINTESTINAL-TRACT

KW - ULCERATIVE-COLITIS

KW - IN-VITRO

KW - BACTERIA

KW - DIVERSITY

KW - 1183 Plant biology, microbiology, virology

KW - 3111 Biomedicine

U2 - 10.1093/femsre/fuw045

DO - 10.1093/femsre/fuw045

M3 - Review Article

VL - 41

SP - 182

EP - 199

JO - FEMS Microbiology Reviews

JF - FEMS Microbiology Reviews

SN - 0168-6445

IS - 2

ER -