Kermit: Guided Long Read Assembly using Coloured Overlap Graphs

Riku Mikael Walve; Pasi Miikka Antero Rastas; Leena Maija Salmela

doi:10.4230/LIPIcs.WABI.2018.11

Kermit: Guided Long Read Assembly using Coloured Overlap Graphs

Riku Mikael Walve, Pasi Miikka Antero Rastas, Leena Maija Salmela

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

Original language	English
Title of host publication	18th International Workshop on Algorithms in Bioinformatics (WABI 2018)
Editors	Laxmi Parida, Esko Ukkonen
Number of pages	11
Place of Publication	Dagstuhl
Publisher	Schloss Dagstuhl - Leibniz-Zentrum für Informatik
Publication date	2018
Pages	11:1-11:11
ISBN (Electronic)	978-3-95977-082-8
DOIs	https://doi.org/10.4230/LIPIcs.WABI.2018.11
Publication status	Published - 2018
MoE publication type	A4 Article in conference proceedings
Event	International Workshop on Algorithms in Bioinformatics - Helsinki, Finland Duration: 20 Aug 2018 → 24 Aug 2018 Conference number: 18

Publication series

Name	Leibniz International Proceedings in Informatics (LIPIcs)
Volume	113
ISSN (Electronic)	1868-8969

Fields of Science

113 Computer and information sciences

Access to Document

10.4230/LIPIcs.WABI.2018.11Licence: CC BY

LIPIcs-WABI-2018-11Final published version, 420 KBLicence: CC BY

Cite this

Walve, R. M., Rastas, P. M. A., & Salmela, L. M. (2018). Kermit: Guided Long Read Assembly using Coloured Overlap Graphs. In L. Parida, & E. Ukkonen (Eds.), 18th International Workshop on Algorithms in Bioinformatics (WABI 2018) (pp. 11:1-11:11). (Leibniz International Proceedings in Informatics (LIPIcs); Vol. 113). Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.WABI.2018.11

Walve, Riku Mikael ; Rastas, Pasi Miikka Antero ; Salmela, Leena Maija. / Kermit : Guided Long Read Assembly using Coloured Overlap Graphs. 18th International Workshop on Algorithms in Bioinformatics (WABI 2018). editor / Laxmi Parida ; Esko Ukkonen. Dagstuhl : Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018. pp. 11:1-11:11 (Leibniz International Proceedings in Informatics (LIPIcs)).

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title = "Kermit: Guided Long Read Assembly using Coloured Overlap Graphs",

keywords = "113 Computer and information sciences",

author = "Walve, {Riku Mikael} and Rastas, {Pasi Miikka Antero} and Salmela, {Leena Maija}",

year = "2018",

doi = "10.4230/LIPIcs.WABI.2018.11",

language = "English",

series = "Leibniz International Proceedings in Informatics (LIPIcs)",

publisher = "Schloss Dagstuhl - Leibniz-Zentrum f{\"u}r Informatik",

pages = "11:1--11:11",

editor = "Laxmi Parida and Esko Ukkonen",

booktitle = "18th International Workshop on Algorithms in Bioinformatics (WABI 2018)",

address = "Germany",

note = "International Workshop on Algorithms in Bioinformatics, WABI 2018 ; Conference date: 20-08-2018 Through 24-08-2018",

}

Walve, RM, Rastas, PMA & Salmela, LM 2018, Kermit: Guided Long Read Assembly using Coloured Overlap Graphs. in L Parida & E Ukkonen (eds), 18th International Workshop on Algorithms in Bioinformatics (WABI 2018). Leibniz International Proceedings in Informatics (LIPIcs), vol. 113, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, Dagstuhl, pp. 11:1-11:11, International Workshop on Algorithms in Bioinformatics, Helsinki, Finland, 20/08/2018. https://doi.org/10.4230/LIPIcs.WABI.2018.11

Kermit: Guided Long Read Assembly using Coloured Overlap Graphs. / Walve, Riku Mikael; Rastas, Pasi Miikka Antero ; Salmela, Leena Maija.
18th International Workshop on Algorithms in Bioinformatics (WABI 2018). ed. / Laxmi Parida; Esko Ukkonen. Dagstuhl: Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018. p. 11:1-11:11 (Leibniz International Proceedings in Informatics (LIPIcs); Vol. 113).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

TY - GEN

T1 - Kermit

T2 - International Workshop on Algorithms in Bioinformatics

AU - Walve, Riku Mikael

AU - Rastas, Pasi Miikka Antero

AU - Salmela, Leena Maija

N1 - Conference code: 18

PY - 2018

Y1 - 2018

KW - 113 Computer and information sciences

U2 - 10.4230/LIPIcs.WABI.2018.11

DO - 10.4230/LIPIcs.WABI.2018.11

M3 - Conference contribution

T3 - Leibniz International Proceedings in Informatics (LIPIcs)

SP - 11:1-11:11

BT - 18th International Workshop on Algorithms in Bioinformatics (WABI 2018)

A2 - Parida, Laxmi

A2 - Ukkonen, Esko

PB - Schloss Dagstuhl - Leibniz-Zentrum für Informatik

CY - Dagstuhl

Y2 - 20 August 2018 through 24 August 2018

ER -

Walve RM, Rastas PMA , Salmela LM. Kermit: Guided Long Read Assembly using Coloured Overlap Graphs. In Parida L, Ukkonen E, editors, 18th International Workshop on Algorithms in Bioinformatics (WABI 2018). Dagstuhl: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. 2018. p. 11:1-11:11. (Leibniz International Proceedings in Informatics (LIPIcs)). doi: 10.4230/LIPIcs.WABI.2018.11