Laplace approximation and natural gradient for Gaussian process regression with heteroscedastic Student-t model

TY - JOUR

T1 - Laplace approximation and natural gradient for Gaussian process regression with heteroscedastic Student-t model

AU - Hartmann, Marcelo

AU - Vanhatalo, Jarno

PY - 2019/7

Y1 - 2019/7

N2 - We propose the Laplace method to derive approximate inference for Gaussian process (GP) regression in the location and scale parameters of the student-t probabilistic model. This allows both mean and variance of data to vary as a function of covariates with the attractive feature that the student-t model has been widely used as a useful tool for robustifying data analysis. The challenge in the approximate inference for the model, lies in the analytical intractability of the posterior distribution and the lack of concavity of the log-likelihood function. We present the natural gradient adaptation for the estimation process which primarily relies on the property that the student-t model naturally has orthogonal parametrization. Due to this particular property of the model the Laplace approximation becomes significantly more robust than the traditional approach using Newton’s methods. We also introduce an alternative Laplace approximation by using model’s Fisher information matrix. According to experiments this alternative approximation provides very similar posterior approximations and predictive performance to the traditional Laplace approximation with model’s Hessian matrix. However, the proposed Laplace–Fisher approximation is faster and more stable to calculate compared to the traditional Laplace approximation. We also compare both of these Laplace approximations with the Markov chain Monte Carlo (MCMC) method. We discuss how our approach can, in general, improve the inference algorithm in cases where the probabilistic model assumed for the data is not log-concave.

AB - We propose the Laplace method to derive approximate inference for Gaussian process (GP) regression in the location and scale parameters of the student-t probabilistic model. This allows both mean and variance of data to vary as a function of covariates with the attractive feature that the student-t model has been widely used as a useful tool for robustifying data analysis. The challenge in the approximate inference for the model, lies in the analytical intractability of the posterior distribution and the lack of concavity of the log-likelihood function. We present the natural gradient adaptation for the estimation process which primarily relies on the property that the student-t model naturally has orthogonal parametrization. Due to this particular property of the model the Laplace approximation becomes significantly more robust than the traditional approach using Newton’s methods. We also introduce an alternative Laplace approximation by using model’s Fisher information matrix. According to experiments this alternative approximation provides very similar posterior approximations and predictive performance to the traditional Laplace approximation with model’s Hessian matrix. However, the proposed Laplace–Fisher approximation is faster and more stable to calculate compared to the traditional Laplace approximation. We also compare both of these Laplace approximations with the Markov chain Monte Carlo (MCMC) method. We discuss how our approach can, in general, improve the inference algorithm in cases where the probabilistic model assumed for the data is not log-concave.

KW - 112 Statistics and probability

KW - 113 Computer and information sciences

KW - 111 Mathematics

U2 - 10.1007/s11222-018-9836-0

DO - 10.1007/s11222-018-9836-0

M3 - Article

VL - 29

SP - 753

EP - 773

JO - Statistics and Computing

JF - Statistics and Computing

SN - 0960-3174

IS - 4

ER -