Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers

Sarah J Spencer, Manu V Tamminen, Sarah P Preheim, Mira T Guo, Adrian W Briggs, Ilana L Brito, David A Weitz, Leena K Pitkanen, Francois Vigneault, Marko P. Juhani Virta, Eric J Alm

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
JournalISME Journal
Volume10
Issue number2
Pages (from-to)427-436
Number of pages10
ISSN1751-7370
DOIs
Publication statusPublished - 2016
MoE publication typeA1 Journal article-refereed

Fields of Science

  • 1181 Ecology, evolutionary biology
  • 1183 Plant biology, microbiology, virology
  • INDIVIDUAL ENVIRONMENTAL BACTERIA
  • SULFATE-REDUCING BACTERIA
  • MICROFLUIDIC DIGITAL PCR
  • EMULSION-PCR
  • SULFITE REDUCTASES
  • AMPLIFICATION
  • SEDIMENTS
  • ALIGNMENT
  • DATABASE
  • PRIMERS

Cite this

Spencer, S. J., Tamminen, M. V., Preheim, S. P., Guo, M. T., Briggs, A. W., Brito, I. L., ... Alm, E. J. (2016). Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers. ISME Journal, 10(2), 427-436. https://doi.org/10.1038/ismej.2015.124
Spencer, Sarah J ; Tamminen, Manu V ; Preheim, Sarah P ; Guo, Mira T ; Briggs, Adrian W ; Brito, Ilana L ; A Weitz, David ; Pitkanen, Leena K ; Vigneault, Francois ; Virta, Marko P. Juhani ; Alm, Eric J. / Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers. In: ISME Journal. 2016 ; Vol. 10, No. 2. pp. 427-436.
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title = "Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers",
keywords = "1181 Ecology, evolutionary biology, 1183 Plant biology, microbiology, virology, INDIVIDUAL ENVIRONMENTAL BACTERIA , SULFATE-REDUCING BACTERIA , MICROFLUIDIC DIGITAL PCR , EMULSION-PCR , SULFITE REDUCTASES , AMPLIFICATION , SEDIMENTS , ALIGNMENT , DATABASE , PRIMERS",
author = "Spencer, {Sarah J} and Tamminen, {Manu V} and Preheim, {Sarah P} and Guo, {Mira T} and Briggs, {Adrian W} and Brito, {Ilana L} and {A Weitz}, David and Pitkanen, {Leena K} and Francois Vigneault and Virta, {Marko P. Juhani} and Alm, {Eric J}",
year = "2016",
doi = "10.1038/ismej.2015.124",
language = "English",
volume = "10",
pages = "427--436",
journal = "ISME Journal",
issn = "1751-7370",
publisher = "Nature Publishing Group",
number = "2",

}

Spencer, SJ, Tamminen, MV, Preheim, SP, Guo, MT, Briggs, AW, Brito, IL, A Weitz, D, Pitkanen, LK, Vigneault, F, Virta, MPJ & Alm, EJ 2016, 'Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers', ISME Journal, vol. 10, no. 2, pp. 427-436. https://doi.org/10.1038/ismej.2015.124

Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers. / Spencer, Sarah J; Tamminen, Manu V; Preheim, Sarah P; Guo, Mira T; Briggs, Adrian W; Brito, Ilana L; A Weitz, David; Pitkanen, Leena K; Vigneault, Francois; Virta, Marko P. Juhani; Alm, Eric J.

In: ISME Journal, Vol. 10, No. 2, 2016, p. 427-436.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers

AU - Spencer, Sarah J

AU - Tamminen, Manu V

AU - Preheim, Sarah P

AU - Guo, Mira T

AU - Briggs, Adrian W

AU - Brito, Ilana L

AU - A Weitz, David

AU - Pitkanen, Leena K

AU - Vigneault, Francois

AU - Virta, Marko P. Juhani

AU - Alm, Eric J

PY - 2016

Y1 - 2016

KW - 1181 Ecology, evolutionary biology

KW - 1183 Plant biology, microbiology, virology

KW - INDIVIDUAL ENVIRONMENTAL BACTERIA

KW - SULFATE-REDUCING BACTERIA

KW - MICROFLUIDIC DIGITAL PCR

KW - EMULSION-PCR

KW - SULFITE REDUCTASES

KW - AMPLIFICATION

KW - SEDIMENTS

KW - ALIGNMENT

KW - DATABASE

KW - PRIMERS

U2 - 10.1038/ismej.2015.124

DO - 10.1038/ismej.2015.124

M3 - Article

VL - 10

SP - 427

EP - 436

JO - ISME Journal

JF - ISME Journal

SN - 1751-7370

IS - 2

ER -