mlplasmids

a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

Sergio Arredondo-Alonso, Malbert R. C. Rogers, Johanna C. Braat, Tess D. Verschuuren, Janetta Top, Jukka Corander, Rob J. L. Willems, Anita C. Schürch

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
Article number000224
JournalMicrobial Genomics
Volume4
Issue number11
Number of pages15
ISSN2057-5858
DOIs
Publication statusPublished - 1 Nov 2018
MoE publication typeA1 Journal article-refereed

Fields of Science

  • whole-genome sequencing
  • plasmid
  • chromosome
  • machine learning
  • antibiotic resistance
  • ESCHERICHIA-COLI
  • GENOME
  • RESISTANCE
  • MCR-1
  • 111 Mathematics

Cite this

Arredondo-Alonso, S., Rogers, M. R. C., Braat, J. C., Verschuuren, T. D., Top, J., Corander, J., ... Schürch, A. C. (2018). mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species. Microbial Genomics, 4(11), [000224]. https://doi.org/10.1099/mgen.0.000224
Arredondo-Alonso, Sergio ; Rogers, Malbert R. C. ; Braat, Johanna C. ; Verschuuren, Tess D. ; Top, Janetta ; Corander, Jukka ; Willems, Rob J. L. ; Schürch, Anita C. / mlplasmids : a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species. In: Microbial Genomics. 2018 ; Vol. 4, No. 11.
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keywords = "whole-genome sequencing, plasmid, chromosome, machine learning, antibiotic resistance, ESCHERICHIA-COLI, GENOME, RESISTANCE, MCR-1, 111 Mathematics",
author = "Sergio Arredondo-Alonso and Rogers, {Malbert R. C.} and Braat, {Johanna C.} and Verschuuren, {Tess D.} and Janetta Top and Jukka Corander and Willems, {Rob J. L.} and Sch{\"u}rch, {Anita C.}",
year = "2018",
month = "11",
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doi = "10.1099/mgen.0.000224",
language = "English",
volume = "4",
journal = "Microbial Genomics",
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Arredondo-Alonso, S, Rogers, MRC, Braat, JC, Verschuuren, TD, Top, J, Corander, J, Willems, RJL & Schürch, AC 2018, 'mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species', Microbial Genomics, vol. 4, no. 11, 000224. https://doi.org/10.1099/mgen.0.000224

mlplasmids : a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species. / Arredondo-Alonso, Sergio; Rogers, Malbert R. C.; Braat, Johanna C.; Verschuuren, Tess D.; Top, Janetta; Corander, Jukka; Willems, Rob J. L.; Schürch, Anita C.

In: Microbial Genomics, Vol. 4, No. 11, 000224, 01.11.2018.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - mlplasmids

T2 - a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

AU - Arredondo-Alonso, Sergio

AU - Rogers, Malbert R. C.

AU - Braat, Johanna C.

AU - Verschuuren, Tess D.

AU - Top, Janetta

AU - Corander, Jukka

AU - Willems, Rob J. L.

AU - Schürch, Anita C.

PY - 2018/11/1

Y1 - 2018/11/1

KW - whole-genome sequencing

KW - plasmid

KW - chromosome

KW - machine learning

KW - antibiotic resistance

KW - ESCHERICHIA-COLI

KW - GENOME

KW - RESISTANCE

KW - MCR-1

KW - 111 Mathematics

U2 - 10.1099/mgen.0.000224

DO - 10.1099/mgen.0.000224

M3 - Article

VL - 4

JO - Microbial Genomics

JF - Microbial Genomics

SN - 2057-5858

IS - 11

M1 - 000224

ER -