PeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments

Tuomo Hartonen; Biswajyoti Sahu; Kashyap Dave; Teemu Kivioja; Jussi Taipale

doi:10.1093/bioinformatics/btw448

PeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments

Tuomo Hartonen, Biswajyoti Sahu, Kashyap Dave, Teemu Kivioja, Jussi Taipale

Research Programs Unit

Research output: Contribution to journal › Conference article › Scientific › peer-review

Original language	English
Journal	Bioinformatics
Volume	32
Issue number	17
Pages (from-to)	629-638
Number of pages	10
ISSN	1367-4803
DOIs	https://doi.org/10.1093/bioinformatics/btw448
Publication status	Published - 1 Sep 2016
MoE publication type	A4 Article in conference proceedings
Event	European Conference on Computational Biology - The Hague, Netherlands Duration: 3 Sep 2016 → 7 Sep 2016 Conference number: 15 (ECCB)

Fields of Science

ALLELE-SPECIFIC EXPRESSION
MODEL-BASED ANALYSIS
SEQ DATA
DNA MICROARRAYS
HIGH-RESOLUTION
GENOME
IDENTIFICATION
SPECIFICITIES
WIDESPREAD
FRAMEWORK
3111 Biomedicine

Access to Document

10.1093/bioinformatics/btw448

Cite this

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title = "PeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments",

keywords = "ALLELE-SPECIFIC EXPRESSION, MODEL-BASED ANALYSIS, SEQ DATA, DNA MICROARRAYS, HIGH-RESOLUTION, GENOME, IDENTIFICATION, SPECIFICITIES, WIDESPREAD, FRAMEWORK, 3111 Biomedicine",

author = "Tuomo Hartonen and Biswajyoti Sahu and Kashyap Dave and Teemu Kivioja and Jussi Taipale",

note = " Volume: 32 ; European Conference on Computational Biology ; Conference date: 03-09-2016 Through 07-09-2016",

year = "2016",

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T2 - European Conference on Computational Biology

AU - Hartonen, Tuomo

AU - Sahu, Biswajyoti

AU - Dave, Kashyap

AU - Kivioja, Teemu

AU - Taipale, Jussi

N1 - Conference code: 15 (ECCB)

PY - 2016/9/1

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KW - ALLELE-SPECIFIC EXPRESSION

KW - MODEL-BASED ANALYSIS

KW - SEQ DATA

KW - DNA MICROARRAYS

KW - HIGH-RESOLUTION

KW - GENOME

KW - IDENTIFICATION

KW - SPECIFICITIES

KW - WIDESPREAD

KW - FRAMEWORK

KW - 3111 Biomedicine

U2 - 10.1093/bioinformatics/btw448

DO - 10.1093/bioinformatics/btw448

M3 - Conference article

VL - 32

SP - 629

EP - 638

JO - Bioinformatics

JF - Bioinformatics

SN - 1367-4803

IS - 17

Y2 - 3 September 2016 through 7 September 2016

ER -