Spatial genomic analysis: A multiplexed transcriptional profiling method that reveals subpopulations of cells within intact tissues

Antti Lignell, Laura Kerosuo

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Original languageEnglish
Title of host publicationStem Cell Niche
EditorsKursad Turksen
Number of pages13
Volume2002
PublisherHumana press
Publication date2019
Pages151-163
ISBN (Print)978-1-4939-9507-3
ISBN (Electronic)978-1-4939-9508-0
DOIs
Publication statusPublished - 2019
MoE publication typeA3 Book chapter

Publication series

NameMethods in Molecular Biology
Volume2002
ISSN (Electronic)1064-3745

Fields of Science

  • Chicken embryo
  • HCR
  • Hybridization chain reaction
  • In vivo single-cell analysis
  • Neural crest stem cell niche
  • Neural crest stem cells
  • Pluripotency
  • Quantitative single-molecule fluorescent in situ hybridization
  • SGA
  • Single-molecule microscopy
  • smFISH
  • Spatial genomic analysis
  • Spatial genomics
  • Spatial tissue transcriptome analysis
  • RNA
  • transcriptome
  • animal cell
  • cell membrane
  • cell subpopulation
  • cell volume
  • DNA probe
  • embryo
  • embryonic stem cell
  • epithelial mesenchymal transition
  • gene expression profiling
  • genomics
  • image analysis
  • image processing
  • machine learning
  • neural crest
  • neural crest cell
  • neural tube
  • nonhuman
  • quantitative analysis
  • RNA degradation
  • single molecule imaging
  • spatial analysis
  • stem cell niche
  • 1182 Biochemistry, cell and molecular biology

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