Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

Teemu Kallonen; Hayley J. Brodrick; Simon R. Harris; Jukka Corander; Nicholas M. Brown; Veronique Martin; Sharon J. Peacock; Julian Parkhill

doi:10.1101/gr.216606.116

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

Teemu Kallonen
, Hayley J. Brodrick
, Simon R. Harris
, Jukka Corander
, Nicholas M. Brown
, Veronique Martin
, Sharon J. Peacock
, Julian Parkhill

Department of Mathematics and Statistics

Research output: Contribution to journal › Article › Scientific › peer-review

Original language	English
Journal	Genome Research
Volume	27
Issue number	8
Pages (from-to)	1437-1449
Number of pages	13
ISSN	1088-9051
DOIs	https://doi.org/10.1101/gr.216606.116
Publication status	Published - Aug 2017
MoE publication type	A1 Journal article-refereed

Fields of Science

VIRULENCE-ASSOCIATED TRAITS
ANTIBIOTIC SUSCEPTIBILITY
ANTIMICROBIAL RESISTANCE
AUTOTRANSPORTER PROTEIN
PATHOGENICITY ISLAND
GENOMIC ANALYSIS
BAPS SOFTWARE
CLONAL GROUP
IDENTIFICATION
BACTEREMIA
1183 Plant biology, microbiology, virology
112 Statistics and probability

Access to Document

10.1101/gr.216606.116

Genome Res.-2017-Kallonen-1437-49Final published version, 728 KBLicence: Unspecified

Cite this

@article{f0285b5a08e447999f7db092c9dfe7bd,

title = "Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131",

keywords = "VIRULENCE-ASSOCIATED TRAITS, ANTIBIOTIC SUSCEPTIBILITY, ANTIMICROBIAL RESISTANCE, AUTOTRANSPORTER PROTEIN, PATHOGENICITY ISLAND, GENOMIC ANALYSIS, BAPS SOFTWARE, CLONAL GROUP, IDENTIFICATION, BACTEREMIA, 1183 Plant biology, microbiology, virology, 112 Statistics and probability",

author = "Teemu Kallonen and Brodrick, \{Hayley J.\} and Harris, \{Simon R.\} and Jukka Corander and Brown, \{Nicholas M.\} and Veronique Martin and Peacock, \{Sharon J.\} and Julian Parkhill",

year = "2017",

month = aug,

doi = "10.1101/gr.216606.116",

language = "English",

volume = "27",

pages = "1437--1449",

journal = "Genome Research",

issn = "1088-9051",

publisher = "Cold Spring Harbor Laboratory Press",

number = "8",

}

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. / Kallonen, Teemu; Brodrick, Hayley J.; Harris, Simon R. et al.
In: Genome Research, Vol. 27, No. 8, 08.2017, p. 1437-1449.

Research output: Contribution to journal › Article › Scientific › peer-review

TY - JOUR

T1 - Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

AU - Kallonen, Teemu

AU - Brodrick, Hayley J.

AU - Harris, Simon R.

AU - Corander, Jukka

AU - Brown, Nicholas M.

AU - Martin, Veronique

AU - Peacock, Sharon J.

AU - Parkhill, Julian

PY - 2017/8

Y1 - 2017/8

KW - VIRULENCE-ASSOCIATED TRAITS

KW - ANTIBIOTIC SUSCEPTIBILITY

KW - ANTIMICROBIAL RESISTANCE

KW - AUTOTRANSPORTER PROTEIN

KW - PATHOGENICITY ISLAND

KW - GENOMIC ANALYSIS

KW - BAPS SOFTWARE

KW - CLONAL GROUP

KW - IDENTIFICATION

KW - BACTEREMIA

KW - 1183 Plant biology, microbiology, virology

KW - 112 Statistics and probability

U2 - 10.1101/gr.216606.116

DO - 10.1101/gr.216606.116

M3 - Article

SN - 1088-9051

VL - 27

SP - 1437

EP - 1449

JO - Genome Research

JF - Genome Research

IS - 8

ER -