TOPAZ: asymmetric suffix array neighbourhood search for massive protein databases

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
Article number278
JournalBMC Bioinformatics
Volume19
Number of pages9
ISSN1471-2105
DOIs
Publication statusPublished - 31 Jul 2018
MoE publication typeA1 Journal article-refereed

Fields of Science

  • 1182 Biochemistry, cell and molecular biology
  • 113 Computer and information sciences
  • Homology search
  • Suffix arrays
  • BLAST
  • HOMOLOGY SEARCH
  • ALIGNMENT

Cite this

@article{90f048f4063947e7b05a25111c5a53b9,
title = "TOPAZ: asymmetric suffix array neighbourhood search for massive protein databases",
keywords = "1182 Biochemistry, cell and molecular biology, 113 Computer and information sciences, Homology search, Suffix arrays, BLAST, HOMOLOGY SEARCH, ALIGNMENT",
author = "Alan Medlar and Liisa Holm",
year = "2018",
month = "7",
day = "31",
doi = "10.1186/s12859-018-2290-3",
language = "English",
volume = "19",
journal = "BMC Bioinformatics",
issn = "1471-2105",
publisher = "BMC",

}

TOPAZ: asymmetric suffix array neighbourhood search for massive protein databases. / Medlar, Alan; Holm, Liisa.

In: BMC Bioinformatics, Vol. 19, 278, 31.07.2018.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - TOPAZ: asymmetric suffix array neighbourhood search for massive protein databases

AU - Medlar, Alan

AU - Holm, Liisa

PY - 2018/7/31

Y1 - 2018/7/31

KW - 1182 Biochemistry, cell and molecular biology

KW - 113 Computer and information sciences

KW - Homology search

KW - Suffix arrays

KW - BLAST

KW - HOMOLOGY SEARCH

KW - ALIGNMENT

U2 - 10.1186/s12859-018-2290-3

DO - 10.1186/s12859-018-2290-3

M3 - Article

VL - 19

JO - BMC Bioinformatics

JF - BMC Bioinformatics

SN - 1471-2105

M1 - 278

ER -