Transcriptome dynamics-based operon prediction in prokaryotes

Vittorio Fortino, Olli-Pekka Smolander, Petri Auvinen, Roberto Tagliaferri, Dario Greco

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
Article number145
JournalBMC Bioinformatics
Volume15
Number of pages14
ISSN1471-2105
DOIs
Publication statusPublished - 16 May 2014
MoE publication typeA1 Journal article-refereed

Fields of Science

  • Operons
  • Computational prediction
  • Condition-dependent operon maps
  • RNA-seq data analysis
  • ESCHERICHIA-COLI
  • RNA-SEQ
  • CODON USAGE
  • GENES
  • CLUSTERS
  • GENOMES
  • DNA
  • EXPRESSION
  • MUTATIONS
  • EVOLUTION
  • 1184 Genetics, developmental biology, physiology
  • 1182 Biochemistry, cell and molecular biology

Cite this

Fortino, Vittorio ; Smolander, Olli-Pekka ; Auvinen, Petri ; Tagliaferri, Roberto ; Greco, Dario. / Transcriptome dynamics-based operon prediction in prokaryotes. In: BMC Bioinformatics. 2014 ; Vol. 15.
@article{5a3c5221a92e48519b3a47ef8bec07c7,
title = "Transcriptome dynamics-based operon prediction in prokaryotes",
keywords = "Operons, Computational prediction, Condition-dependent operon maps, RNA-seq data analysis, ESCHERICHIA-COLI, RNA-SEQ, CODON USAGE, GENES, CLUSTERS, GENOMES, DNA, EXPRESSION, MUTATIONS, EVOLUTION, 1184 Genetics, developmental biology, physiology, 1182 Biochemistry, cell and molecular biology",
author = "Vittorio Fortino and Olli-Pekka Smolander and Petri Auvinen and Roberto Tagliaferri and Dario Greco",
year = "2014",
month = "5",
day = "16",
doi = "10.1186/1471-2105-15-145",
language = "English",
volume = "15",
journal = "BMC Bioinformatics",
issn = "1471-2105",
publisher = "BMC",

}

Transcriptome dynamics-based operon prediction in prokaryotes. / Fortino, Vittorio; Smolander, Olli-Pekka; Auvinen, Petri; Tagliaferri, Roberto; Greco, Dario.

In: BMC Bioinformatics, Vol. 15, 145, 16.05.2014.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Transcriptome dynamics-based operon prediction in prokaryotes

AU - Fortino, Vittorio

AU - Smolander, Olli-Pekka

AU - Auvinen, Petri

AU - Tagliaferri, Roberto

AU - Greco, Dario

PY - 2014/5/16

Y1 - 2014/5/16

KW - Operons

KW - Computational prediction

KW - Condition-dependent operon maps

KW - RNA-seq data analysis

KW - ESCHERICHIA-COLI

KW - RNA-SEQ

KW - CODON USAGE

KW - GENES

KW - CLUSTERS

KW - GENOMES

KW - DNA

KW - EXPRESSION

KW - MUTATIONS

KW - EVOLUTION

KW - 1184 Genetics, developmental biology, physiology

KW - 1182 Biochemistry, cell and molecular biology

U2 - 10.1186/1471-2105-15-145

DO - 10.1186/1471-2105-15-145

M3 - Article

VL - 15

JO - BMC Bioinformatics

JF - BMC Bioinformatics

SN - 1471-2105

M1 - 145

ER -