• Viikinkaari 1, Biocentre 3

    00790 Helsinki

    Finland

  • PL 27 (Latokartanonkaari 7)

    00014

    Finland

20132019
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Personlig profil

Information om forskning och undervisning

Current areas of research interest:

  • Remote sensing:
  1. Chlorophyll fluorescence, from leaf to landscape
  2. Field and automated canopy spectroscopy 
  3. Physiological optics (e.g. Photochemical Reflectance Index)
  4. Physically-based modelling techniques
  • Ecophysiology:
  1. Photosynthesis
  2. BVOCs
  • Modern software and hardware in Environmental Science:
  1. Data science and associated languages (Python numerical stack and R)
  2. Affordable instrumentation development (e.g. RPI) 
  3. Promoting up-to-date software practice (e.g. version control)

I am instructing on "Environmental Data Science" which covers some of the practical aspects of working with data in R and Python. We use Jupyter notebooks for course content which you can find on our lab's github:

https://github.com/OptPhotLab/EnvDataSciNotebooks

https://github.com/OptPhotLab/EnvDataSciNotebooksPython

 

 

Keywords

  • 1172 Miljövetenskap
  • 4112 Skogsvetenskap

Internationellt och inhemskt samarbete Publikationer och projekt inom de senaste fem åren.

Publikationer 2013 2019

  • 12 Artikel
  • 7 Konferensbidrag
  • 1 Doktorsavhandling

Diurnal and Seasonal Solar Induced Chlorophyll Fluorescence and Photosynthesis in a Boreal Scots Pine Canopy

Nichol, C. J., Drolet, G., Porcar-Castell, A., Wade, T., Sabater, N., Middleton, E. M., MacLellan, C., Levula, J., Mammarella, I., Vesala, T. & Atherton, J., 1 feb 2019, I : Remote Sensing. 11, 3, 22 s., 273.

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

Öppen tillgång
Fil

Leaf-Level Spectral Fluorescence Measurements: Comparing Methodologies for Broadleaves and Needles

Rajewicz, P. A., Atherton, J., Alonso, L. & Porcar-Castell, A., 1 mar 2019, I : Remote Sensing. 11, 5, 20 s., 532.

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

Öppen tillgång
Fil

Simulating solar-induced chlorophyll fluorescence in a boreal forest stand reconstructed from terrestrial laser scanning measurements

Liu, W., Atherton, J., Mõttus, M., Gastellu-Etchegorry, J-P., Malenovský, Z., Raumonen, P., Åkerblom, M., Mäkipää, R. & Porcar-Castell, A., 2 jul 2019, I : Remote Sensing of Environment.

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

Öppen tillgång
Fil

Projekter 2014 2016

Aktiviteter 2013 2017

Remote Sensing (Tidskrift)

Jon Atherton (Referentgranskare)
2017

Aktivitet: Typer för peer review av output och redaktionsarbeteReferentgranskning av manuskript

Birmingham Institute of Forest Research Free-Air Carbon Dioxide Enrichment (FACE) experiment

Jon Atherton (Besökande forskare)
18 sep 201723 sep 2017

Aktivitet: Typer för besök till extern institutionAkademisk besök på annan institution

Upscaling the Optical Properties of leaves to model their contribution to canopy light use efficiency and carbon assimilation over vertical and horizontal profiles of spectral irradiance

T Matthew Robson (Handledare), Jonathan Mark Atherton (Handledare), Anu Heikkilä (Handledare)
1 apr 20171 sep 2021

Aktivitet: ExaminationstyperHandledare eller bihandledare av doktorsavhandling

Advanced Analysis of Atmospheric Processes and Feedbacks and Atmosphere-Biosphere Interactions (Winter school 2015)

Jon Atherton (Deltagare)
16 mar 201526 mar 2015

Aktivitet: Andra aktivitetstyperTyper av övriga aktiviteter - Extern undervisning och koordinering av ämne

Annual seminar of The Centre of Excellence in Atmospheric Science - From Molecular and Biological processes to The Global Climate

Jon Atherton (Talare: Presentation)
22 sep 2015

Aktivitet: Typer för deltagande i eller organisering av evenemangArrangemang av och deltagande i konferens/workshop/kurs/seminarium