Mikael Lundin

2024

Diagnosis of soil-transmitted helminth infections with digital mobile microscopy and artificial intelligence in a resource-limited setting

Lundin, J., Suutala, A., Holmström, O., Henriksson, S., Valkamo, S., Kaingu, H., Kinyua, F., Muinde, M., Lundin, M., Diwan, V., Mårtensson, A. & Linder, N., 1 apr. 2024, I: PLoS Neglected Tropical Diseases. 18, 4, 21 s., e0012041.

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External validation of a deep learning-based algorithm for detection of tall cells in papillary thyroid carcinoma: A multicenter study

Stenman, S., Bétrisey, S., Vainio, P., Huvila, J., Lundin, M., Linder, N., Schmitt, A., Perren, A., Dettmer, M. S., Haglund, C., Arola, J. & Lundin, J., 2024, I: Journal of pathology informatics. 15, 8 s., 100366.

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2023

A Novel Deep Learning-Based Point-of-Care Diagnostic Method for Detecting Plasmodium falciparum with Fluorescence Digital Microscopy

Holmström, O., Stenman, S., Suutala, A., Moilanen, H., Kücükel, H., Ngasala, B., Mårtensson, A., Mhamilawa, L., Aydin-Schmidt, B., Lundin, M., Diwan, V., Linder, N. & Lundin, J., 1 jan. 2023, Advances in Medical Imaging, Detection, and Diagnosis. Bawa, R., Audette, G. F., Bawa, S. R., Patel, B., Johnson, B. D. & Khanna, R. (red.). 1st ed. red. Jenny Stanford Publishing, s. 979-1000 22 s. (Current Issues in Medicine; vol. 4).

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Development and evaluation of deep learning algorithms for assessment of acute burns and the need for surgery

Boissin, C., Laflamme, L., Fransen, J., Lundin, M., Huss, F., Wallis, L., Allorto, N. & Lundin, J., 31 jan. 2023, I: Scientific Reports. 13, 1, 9 s., 1794.

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2022

A deep learning–based algorithm for tall cell detection in papillary thyroid carcinoma

Stenman, S., Linder, N., Lundin, M., Haglund, C., Arola, J. & Lundin, J., 9 aug. 2022, I: PLoS One. 17, 8, 14 s., e0272696.

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Outcome and biomarker supervised deep learning for survival prediction in two multicenter breast cancer series

Bychkov, D., Joensuu, H., Nordling, S., Tiulpin, A., Kücükel, H., Lundin, M., Sihto, H., Isola, J., Lehtimäki, T., Kellokumpu-Lehtinen, P. L., Smitten, K., Lundin, J. & Linder, N., 1 jan. 2022, I: Journal of pathology informatics. 13, 1, s. 9 1 s.

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2021

Deep learning identifies morphological features in breast cancer predictive of cancer ERBB2 status and trastuzumab treatment efficacy

Bychkov, D., Linder, N., Tiulpin, A., Kücükel, H., Lundin, M., Nordling, S., Sihto, H., Isola, J., Lehtimäki, T., Kellokumpu-Lehtinen, P.-L., von Smitten, K., Joensuu, H. & Lundin, J., 17 feb. 2021, I: Scientific Reports. 11, 1, 10 s., 4037.

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Metastatic uveal melanoma managed with best supportive care

Rantala, E. S., Hernberg, M. M., Lundin, M., Lundin, J. & Kivelä, T. T., 2 jan. 2021, I: Acta Oncologica. 60, 1, s. 135–139 5 s.

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Point-of-Care Digital Cytology With Artificial Intelligence for Cervical Cancer Screening in a Resource-Limited Setting

Holmström, O., Linder, N., Kaingu, H., Mbuuko, N., Mbete, J., Kinyua, F., Törnquist, S., Muinde, M., Krogerus, L., Lundin, M., Diwan, V. & Lundin, J., 17 mars 2021, I: JAMA Network Open. 4, 3, s. e211740-e211740 13 s., 211740.

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2020

A novel deep learning-based point-of-care diagnostic method for detecting Plasmodium falciparum with fluorescence digital microscopy

Holmström, O., Stenman, S., Suutala, A., Moilanen, H., Kücükel, H., Ngasala, B., Mårtensson, A., Mhamilawa, L., Aydin-Schmidt, B., Lundin, M., Diwan, V., Linder, N. & Lundin, J., 17 nov. 2020, I: PLoS One. 15, 11, 17 s., e0242355.

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Dataset for "Metastatic Uveal Melanoma Managed with Best Supportive Care"

Rantala, E., Hernberg, M. M., Lundin, M., Lundin, J. & Kivelä, T., 28 aug. 2020

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2019

Breast cancer outcome prediction with tumour tissue images and machine learning

Turkki, R., Byckhov, D., Lundin, M., Isola, J., Nordling, S., Kovanen, P. E., Verrill, C., von Smitten, K., Joensuu, H., Lundin, J. & Linder, N., aug. 2019, I: Breast Cancer Research and Treatment. 177, 1, s. 41-52 12 s.

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Deep learning for detecting tumour-infiltrating lymphocytes in testicular germ cell tumours

Linder, N., Taylor, J. C., Colling, R., Pell, R., Alveyn, E., Joseph, J., Protheroe, A., Lundin, M., Lundin, J. & Verrill, C., feb. 2019, I: Journal of Clinical Pathology. 72, 2, s. 157-164 8 s.

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Detection of breast cancer lymph node metastases in frozen sections with a point-of care low-cost microscope scanner

Holmström, O., Linder, N., Moilanen, H., Suutala, A., Nordling, S., Ståhls, A., Lundin, M., Diwan, V. & Lundin, J., 19 mars 2019, I: PLoS One. 14, 3, 15 s., 0208366.

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Using online game-based platforms to improve student performance and engagement in histology teaching

Felszeghy, S., Pasonen-Seppanen, S., Koskela, A., Nieminen, P., Härkönen, K., Paldanius, K. M. A., Gabbouj, S., Ketola, K., Hiltunen, M., Lundin, M., Haapaniemi, T., Sointu, E., Bauman, E. B., Gilbert, G. E., Morton, D. & Mahonen, A., 22 juli 2019, I: BMC Medical Education. 19, 11 s.

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2018

Deep learning based tissue analysis predicts outcome in colorectal cancer

Bychkov, D., Linder, N., Turkki, R., Nordling, S., Kovanen, P. E., Verrill, C., Walliander, M., Lundin, M., Haglund, C. & Lundin, J., 21 feb. 2018, I: Scientific Reports. 8, 11 s., 3395.

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Increased HSF1 expression predicts shorter disease-specific survival of prostate cancer patients following radical prostatectomy

Björk, J. K., Ahonen, I., Mirtti, T., Erickson, A., Rannikko, A., Butzow, A., Nordling, S., Lundin, J., Lundin, M., Sistonen, L., Nees, M. & Akerfelt, M., 2018, I: Oncotarget. 9, 58, s. 31200-31213 14 s.

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2017

Point-of-care mobile digital microscopy and deep learning for the detection of soil-transmitted helminths and Schistosoma haematobium

Holmstrom, O., Linder, N., Ngasala, B., Martensson, A., Linder, E., Lundin, M., Moilanen, H., Suutala, A., Diwan, V. & Lundin, J., 2017, I: Global health action. 10, 9 s., 1337325.

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UCHL5 expression associates with improved survival in lymph-node-positive rectal cancer

Arpalahti, L., Hagstrom, J., Mustonen, H., Lundin, M., Haglund, C. & Holmberg, C. I., 6 juli 2017, I: Tumor Biology. 39, 7, 8 s.

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2016

Loss of PTEN expression in ERG-negative prostate cancer predicts secondary therapies and leads to shorter disease-specific survival time after radical prostatectomy

Lahdensuo, K., Erickson, A., Saarinen, I., Seikkula, H., Lundin, J., Lundin, M., Nordling, S., Butzow, A., Vasarainen, H., Bostrom, P. J., Taimen, P., Rannikko, A. & Mirtti, T., dec. 2016, I: Modern Pathology. 29, 12, s. 1565-1574 10 s.

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2015

Androgen receptor-interacting protein HSPBAP1 facilitates growth of prostate cancer cells in androgen-deficient conditions

Saeed, K., Östling, P. K., Björkman, M., Mirtti, T., Alanen, K., Vesterinen, T., Sankila, A., Lundin, J., Lundin, M., Rannikko, A., Nordling, S., Mpindi, J.-P., Kohonen, P., Iljin, K., Kallioniemi, O. & Rantala, J. K., 2015, I: International Journal of Cancer. 136, 11, s. 2535-2545 11 s.

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Assessment of tumour viability in human lung cancer xenografts with texture-based image analysis

Turkki, R., Linder, N., Holopainen, T., Wang, Y., Grote, A., Lundin, M., Alitalo, K. & Lundin, J., aug. 2015, I: Journal of Clinical Pathology. 68, 8, s. 614-621 8 s.

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Exploring viewing behavior data from whole slide images to predict correctness of students' answers during practical exams in oral pathology

Walkowski, S., Lundin, M., Szymas, J. & Lundin, J., 2015, I: Journal of pathology informatics. 6, 28.

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Quantification of Estrogen Receptor-Alpha Expression in Human Breast Carcinomas With a Miniaturized, Low-Cost Digital Microscope: A Comparison with a High-End Whole Slide-Scanner: PLoS One

Holmström, O., Linder, N., Lundin, M., Moilanen, H., Suutala, A., Turkki, R., Joensuu, H., Isola, J., Diwan, V. & Lundin, J., 2015, I: PLoS One. 10, 12, 16 s., 0144688.

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2014

A Malaria Diagnostic Tool Based on Computer Vision Screening and Visualization of Plasmodium falciparum Candidate Areas in Digitized Blood Smears

Linder, N., Turkki, R., Walliander, M., Martensson, A., Diwan, V., Rahtu, E., Pietikainen, M., Lundin, M. & Lundin, J., 21 aug. 2014, I: PLoS One. 9, 8, 12 s., 104855.

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Exploring Viewing Behavior Data from Whole Slide Images to Predict Correctness of Students' Answers during Practical Exams in Oral Pathology

Walkowski, S., Lundin, M., Szymas, J. & Lundin, J., 2014, I: Analytical cellular pathology. 2014, 2 s., 706470.

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Students' performance during practical examination on whole slide images using view path tracking

Walkowski, S., Lundin, M., Szymas, J. & Lundin, J., 30 okt. 2014, I: Diagnostic Pathology. 9, 8 s., 208.

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2013

An open-source, MATLAB based annotation tool for virtual slides

Turkki, R., Walliander, M., Ojansivu, V., Linder, N., Lundin, M. & Lundin, J., 2013, I: Diagnostic Pathology. 8, Suppl. 1, 4 s., S30.

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Automated classification of breast cancer morphology in histopathological images

Ojansivu, V., Linder, N., Rahtu, E., Pietikäinen, M., Lundin, M., Joensuu, H. & Lundin, J., 2013, I: Diagnostic Pathology. 8, Suppl. 1, s. S29 4 s.

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Concomitant Tumor Expression of EGFR and TATI/SPINK1 Associates with Better Prognosis in Colorectal Cancer

Koskensalo, S., Louhimo, J., Hagström, J., Lundin, M., Stenman, U. H. & Haglund, C., 25 okt. 2013, I: PLoS One. 8, 10, 7 s., e76906 .

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On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision

Linder, E., Grote, A., Varjo, S., Linder, N., Lebbad, M., Lundin, M., Diwan, V., Hannuksela, J. & Lundin, J., dec. 2013, I: PLoS Neglected Tropical Diseases. 7, 12, 9 s., 2547.

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2012

Effect of image compression and scaling on automated scoring of immunohistochemical stainings and segmentation of tumor epithelium

Konsti, J., Lundin, M., Linder, N., Haglund, C., Blomqvist, C., Nevanlinna, H., Aaltonen, K., Nordling, S. & Lundin, J., 2012, I: Diagnostic Pathology. 7, Article Number: 29, s. - 9 s.

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Identification of tumor epithelium and stroma in tissue microarrays using texture analysis

Linder, N., Konsti, J., Turkki, R., Rahtu, E., Lundin, M., Nordling, F. S. A., Haglund, C., Ahonen, T., Pietikainen, M. & Lundin, J., 2012, I: Diagnostic Pathology. 7, s. Article Number 22 11 s.

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Lack of MMP-9 expression is a marker for poor prognosis in Dukes' B colorectal cancer

Koskensalo, S., Hagström, J. K., Linder, N., Lundin, M. E., Sorsa, T., Louhimo, J. & Haglund, C., 7 dec. 2012, I: BMC Clinical Pathology. 12, 24, 7 s.

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Systematic knockdown of epigenetic enzymes identifies a novel histone demethylase PHF8 overexpressed in prostate cancer with an impact on cell proliferation, migration and invasion.

Björkman, M., Östling, P. K., Härmä, V., Virtanen, J., Mpindi, J., Rantala, J., Mirtti, T., Vesterinen, T., Lundin, M. E., Sankila, A. M., Rannikko, A. S., Kaivanto, E., Kohonen, P., Kallioniemi, O.-P. & Nees, M., 2012, I: Oncogene. 31, 29, s. 3444-3456 13 s.

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2011

An extensive tumor array analysis supports tumor suppressive role for nucleophosmin in breast cancer

Karhemo, P.-R., Rivinoja, A., Lundin, J. E., Hyvönen, M., Chernenko, A., Lammi, J., Sihto, H., Lundin, M. E., Heikkilä, P., Joensuu, H., Bono, P. & Laakkonen, P. M., 2011, I: The American Journal of Pathology. 179, 2, s. 1004-1014 14 s.

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Breast cancer biological subtypes and protein expression predict for the preferential distant metastasis sites: a nationwide cohort study

Sihto, H., Lundin, J., Lundin, M., Lehtimaki, T., Ristimaki, A., Holli, K., Sailas, L., Kataja, V., Turpeenniemi-Hujanen, T., Isola, J., Heikkila, P. & Joensuu, H., 2011, I: Breast Cancer Research. 13, s. R87 11 s.

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Development and evaluation of a virtual microscopy application for automated assessment of Ki-67 expression in breast cancer

Konsti, J. P., Lundin, M. E., Joensuu, H., Lehtimäki, T. E., Sihto, H., Holli, K., Turpeenniemi-Hujanen, T., Kataja, V., Sailas, L., Isola, J. & Lundin, J. E., 25 jan. 2011, I: BMC Clinical Pathology. 11, s. art. no. 3

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Dual role of FoxA1 in androgen receptor binding to chromatin, androgen signalling and prostate cancer

Sahu, B., Laakso, M., Ovaska, K., Mirtti, T., Lundin, J., Rannikko, A., Sankila, A., Turunen, J.-P., Lundin, M., Konsti, J., Vesterinen, T., Nordling, S., Kallioniemi, O., Hautaniemi, S. & Janne, O. A., 2011, I: EMBO Journal. 30, 19, s. 3962-3976 15 s.

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2010

Automated vision quantitative assessment of Ki-67 proliferation index in a nationwide series of patients with breast cancer

Konsti, J., Lundin, M., Joensuu, H. & Lundin, J., 2010, I: Virchows Archiv. 457, s. 147-147 1 s.

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2009

Arrangement of large scale web slide seminars. Experiences from the ECP 2007 and ECP 2009

Lundin, M., Konsti, J. & Lundin, J., 2009, I: Virchows Archiv. 455, s. 35-35 1 s.

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Mikael Lundin

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