Pasi Rastas

E-postadresspasi.rastashelsinkifi

Forskningsoutput per år

Information om forskning och undervisning

My background is in computer science and bioinformatics. In 2009, I completed my PhD in computer science from the University of Helsinki. Since then, I have worked in several research groups in Finland and UK. Currently I am working as staff scientist in the biodata analytics unit, HiLIFE/Institute of Biotechnology, University of Helsinki. My research interests include population genetics, genomics, linkage mapping and similar topics.

Vetenskapsgrenar

1181 Ekologi, evolutionsbiologi
118 Biovetenskaper
113 Data- och informationsvetenskap

51 Artikel
5 Konferensbidrag
2 Kapitel
1 Programvara
Mer
- 1 Doktorsavhandling

Recovering ecological interactions by mining non-target data from whole genome re-sequencing projects
Jones, M., Rastas, P., Chacon-Duque, C., Nair, A., Dileo, M. F., Oostra, V., Saastamoinen, M. & Duplouy, A., 21 jan. 2025, (!!In preparation) I: bioRxiv : the preprint server for biology .
Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig
A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats
de Jong, T. V., Pan, Y., Rastas, P., Munro, D., Tutaj, M., Akil, H., Benner, C., Chen, D., Chitre, A. S., Chow, W., Colonna, V., Dalgard, C. L., Demos, W. M., Doris, P. A., Garrison, E., Geurts, A. M., Gunturkun, H. M., Guryev, V., Hourlier, T. & Howe, K. & 31 andra, Huang, J., Kalbfleisch, T., Kim, P., Li, L., Mahaffey, S., Martin, F. J., Mohammadi, P., Ozel, A. B., Polesskaya, O., Pravenec, M., Prins, P., Sebat, J., Smith, J. R., Woods, L. C. S., Tabakoff, B., Tracey, A., Uliano-Silva, M., Villani, F., Wang, H., Sharp, B. M., Telese, F., Jiang, Z., Saba, L., Wang, X., Murphy, T. D., Palmer, A. A., Kwitek, A. E., Dwinell, M. R., Williams, R. W., Li, J. Z. & Chen, H., 10 apr. 2024, I: Cell genomics. 4, 4, 22 s., 100527.
Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

Öppen tillgång
Fil
Dissecting the genetic architecture of quantitative traits using genome-wide identity-by-descent sharing
Fraimout, A., Guillaume, F., Li, Z., Sillanpää, M. J., Rastas, P. & Merilä, J., mars 2024, I: Molecular Ecology. 33, 6, 15 s., e17299.
Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

Öppen tillgång
Fil
Heterogeneous genomic architecture of skeletal armour traits in sticklebacks
Yi, X., Kemppainen, P., Reid, K., Chen, Y., Rastas, P., Fraimout, A. & Merilä, J., sep. 2024, I: Journal of Evolutionary Biology. 37, 9, s. 995-1008 14 s.
Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

Öppen tillgång
Fil
High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulata
Vu, S. V., Kumar, M., Rastas, P., Boudry, P., Gheyas, A., Bean, T. P., Nguyen, M. T., Tran, K. D., Geist, J., Nguyen, H. H., O'Connor, W., Tran, H. L. N., Le, T. T., Cao, G. T., Nguyen, T. T. A. & Vu, I. V., 2024, I: Aquaculture International. 32, s. 10109–10122 14 s.
Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

3 Aktiv

Strawberry green revolution: Breaking barriers to high yield through targeted mutagenesis of developmental regulators
Hytönen, T. (Projektledare), Fan, G. (deltagare), Rastas, P. (deltagare), Suprun, S. (deltagare), Toivainen, T. (deltagare) & Zhou, Q. (deltagare)
Suomen Akatemia Projektilaskutus
01/01/2025 → 31/12/2026
Projekt: Finlands Akademi: Akademiprojekt med särskild inriktning
TreeBio: Center of Excellence in Tree Biology (TreeBio)
Helariutta, Y. (Projektledare), Nieminen, K. (Projektledare), Pyhäjärvi, T. S. (Projektledare), Salojärvi, J. (Projektledare), Blajecka, K. (deltagare), Carrió-Seguí, À. (deltagare), Hou, M. (deltagare), Leppälä, K. M. (deltagare), Liu, Z. (deltagare), Marmara, E. (deltagare), Muranen, S. J. (deltagare), Mäkelä, M. H. (deltagare), Ord, J. (deltagare), Punttila, J. H. (deltagare), Rastas, P. (deltagare) & Schmidtová, M. (deltagare)
Finlands Akademi
01/01/2024 → 31/12/2026
Projekt: Dinlands Akademi: Spetsforskningsenhet
ASTROS: How meristems guide plant reproductive development? Jane and Aatos Erkko Foundation
Elomaa, P. (Projektledare), Hytönen, T. (Principal Investigator), Ishihara, H. (deltagare), Koivumaa, J. M. (deltagare), Mackenzie, K. (deltagare), Rastas, P. (deltagare), Suprun, S. (deltagare), Vaattovaara, A. (deltagare), Wang, F. (deltagare) & Zhou, Q. (deltagare)
Jane ja Aatos Erkon säätiö
01/01/2022 → 31/08/2026
Projekt: Stiftelser och fonder

Trees can sense their own weight says new study
Rastas, P., Koivula, H. & Mähönen, A. P.
31/01/2020
1 objekt av Mediabevakning
Press/media: !!Press / Media
-UNIVERSITY OF HELSINKI: Trees might be 'aware' of their size
Rastas, P. & Koivula, H.
31/01/2020
1 objekt av Mediabevakning
Press/media: !!Press / Media
Trees might be “aware” of their size
Rastas, P., Koivula, H. & Mähönen, A. P.
30/01/2020
2 objekt av Mediabevakning
Press/media: !!Press / Media
With the help of Saimaa ringed seal, a bastard from the past reveals the potential for human hybrids
Rastas, P. & Auvinen, P.
29/11/2018
1 objekt av Mediabevakning
Press/media: !!Press / Media

Pasi Rastas

Personlig profil

Information om forskning och undervisning

Vetenskapsgrenar

Samarbeten och ledande forskningsområden under de senaste fem åren

Fördjupning

Recovering ecological interactions by mining non-target data from whole genome re-sequencing projects

A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats

Dissecting the genetic architecture of quantitative traits using genome-wide identity-by-descent sharing

Heterogeneous genomic architecture of skeletal armour traits in sticklebacks

High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulata

Strawberry green revolution: Breaking barriers to high yield through targeted mutagenesis of developmental regulators

TreeBio: Center of Excellence in Tree Biology (TreeBio)

ASTROS: How meristems guide plant reproductive development? Jane and Aatos Erkko Foundation

Trees can sense their own weight says new study

-UNIVERSITY OF HELSINKI: Trees might be 'aware' of their size

Trees might be “aware” of their size

With the help of Saimaa ringed seal, a bastard from the past reveals the potential for human hybrids

Pasi Rastas

Personlig profil

Information om forskning och undervisning

Vetenskapsgrenar

Samarbeten och ledande forskningsområden under de senaste fem åren

Forskningsresultat

Projekt

Tidningsurklipp