Forskningsresultat per år
Forskningsresultat per år
Personlig profil
Meritförteckning
Educations:
- (2016-2019) MSc in Life Science - Bioinformatics Major, Aalto University, Espoo, Finland
- thesis title: Application of variation of sparse non-linear CCA for feature selection in cancer cell lines sensitivity prediction
- (2013-2016) MSc in Computer Science, Åbo Akademi University, Turku, Finland
- thesis title: Quantitative refinement of EGFR signaling pathway
Work Experiences:
- (05.2020-04.2022) Research Assistant, Network pharmacology for personalized medicine, University
of Helsinki, Finland - (2017-2019) Research Assistant, Kernel Methods, Pattern Analysis, and Computational Metabolomics (KEPACO) research GROUP, Aalto University - Helsinki Institute for Information Technology, Espoo, Finland
- (2014-2016) Research Assistant, Computational Biomodeling Laboratory (Combio), Åbo Akademi University, Turku, Finland
- Teaching in courses such as Data Science, Machine Learning Basic Principles, Kernel Methods In Machine Learning, and Informatics Approaches for Life Science Omics.
Research Interests:
- Machine Learning and Data Science for medical and biological data
- Prognoses and Diagnoses with AI
- Multi-modals
- Precision Medicine
- Drug Sensitivity and Resistance
Externa befattningar
Department of computer science; Research assistant and master student., Aalto University
1 maj 2017 → 15 maj 2020
Vetenskapsgrenar
- 113 Data- och informationsvetenskap
Internationellt och inhemskt samarbete
Publikationer och projekt inom de senaste fem åren.
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BPR3P0128, a non-nucleoside RNA-dependent RNA polymerase inhibitor, inhibits SARS-CoV-2 variants of concern and exerts synergistic antiviral activity in combination with remdesivir
Tang, W.-F., Chang, Y.-H., Lin, C.-C., Jheng, J.-R., Hsieh, C.-F., Chin, Y.-F., Chang, T.-Y., Lee, J.-C., Liang, P.-H., Lin, C.-Y., Lin, G.-H., Cai, J.-Y., Chen, Y.-L., Chen, Y.-S., Tsai, S.-K., Liu, P.-C., Yang, C.-M., Shadbahr, T., Tang, J. & Hsu, Y.-L. & 8 andra, , apr. 2024, I: Antimicrobial Agents and Chemotherapy. 68, 4, 26 s., e00956-23.Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review
Öppen tillgångFil -
Recent methodological advances in federated learning for healthcare
BloodCounts! consortium, Zhang, F., Kreuter, D., Chen, Y., Shadbahr, T. & Schönlieb, C. B., 14 juni 2024, I: Patterns. 5, 6, 16 s., 101006.Forskningsoutput: Tidskriftsbidrag › Översiktsartikel › Peer review
Öppen tillgångFil -
A pipeline to further enhance quality, integrity and reusability of the NCCID clinical data
Breger, A., Selby, I., Roberts, M., Babar, J., Gkrania-Klotsas, E., Preller, J., Escudero Sánchez, L., Dittmer, S., Thorpe, M., Gilbey, J., Jefferson, E., Langs, G., Yang, G., Xing, X., Nan, Y., Li, M., Prosch, H., Stanczuk, J., Tang, J. & Teare, P. & 14 andra, , 27 juli 2023, I: Scientific data . 10, 1, 16 s., 493.Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review
Öppen tillgångFil -
Navigating the development challenges in creating complex data systems
Dittmer, S., Roberts, M., Gilbey, J., Biguri, A., Selby, I., Breger, A., Thorpe, M., Weir-McCall, J. R., Gkrania-Klotsas, E., Korhonen, A., Jefferson, E., Langs, G., Yang, G., Prosch, H., Stanczuk, J., Tang, J., Babar, J., Escudero Sánchez, L., Teare, P. & Patel, M. & 10 andra, , juli 2023, I: Nature Machine Intelligence. 5, 7, s. 681-686 6 s.Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review
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Prognostic impact of prostate cancer grade inflation in targeted biopsies
Batouche, A. O., Czeizler, E., Lehto, T.-P., Erickson, A., Shadbahr, T., Mirtti, T., Pohjonen, J. S. & Rannikko, A. S., feb. 2023, I: European Urology. 83, s. S1371-S1372 2 s.Forskningsoutput: Tidskriftsbidrag › Mötesabstrakt › Peer review
Öppen tillgång
Projekter
- 1 Aktiv
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Tuomas Mirtti Jusélius 1/3 2024-25
Mirtti, T. (Projektledare), Batouche, A. O. (deltagare), Jaakkola, O. A. A. (deltagare), Laajala, T. D. (deltagare), Lehto, T.-P. (deltagare), Pirinen, I. E. (deltagare) & Shadbahr, T. (deltagare)
Sigrid Juséliuksen Säätiö @003701165704@
01/05/2024 → 30/04/2025
Projekt: Stiftelser och fonder