A safe and complete algorithm for metagenomic assembly

Nidia Obscura Acosta, Veli Mäkinen, Alexandru I. Tomescu

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

Originalspråkengelska
Artikelnummer3
TidskriftAlgorithms for Molecular Biology
Volym13
Antal sidor12
ISSN1748-7188
DOI
StatusPublicerad - 7 feb 2018
MoE-publikationstypA1 Tidskriftsartikel-refererad

Vetenskapsgrenar

  • 113 Data- och informationsvetenskap
  • 1182 Biokemi, cell- och molekylärbiologi

Citera det här

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title = "A safe and complete algorithm for metagenomic assembly",
keywords = "Genome assembly, Contig assembly, Metagenomics, Graph algorithm, Circular walk, DE-NOVO ASSEMBLER, BRUIJN GRAPHS, SEQUENCE, PERSISTENCY, ALIGNMENT, GENOMES, REGIONS, 113 Computer and information sciences, 1182 Biochemistry, cell and molecular biology",
author = "Acosta, {Nidia Obscura} and Veli M{\"a}kinen and Tomescu, {Alexandru I.}",
year = "2018",
month = "2",
day = "7",
doi = "10.1186/s13015-018-0122-7",
language = "English",
volume = "13",
journal = "Algorithms for Molecular Biology",
issn = "1748-7188",
publisher = "BMC",

}

A safe and complete algorithm for metagenomic assembly. / Acosta, Nidia Obscura; Mäkinen, Veli; Tomescu, Alexandru I.

I: Algorithms for Molecular Biology, Vol. 13, 3, 07.02.2018.

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

TY - JOUR

T1 - A safe and complete algorithm for metagenomic assembly

AU - Acosta, Nidia Obscura

AU - Mäkinen, Veli

AU - Tomescu, Alexandru I.

PY - 2018/2/7

Y1 - 2018/2/7

KW - Genome assembly

KW - Contig assembly

KW - Metagenomics

KW - Graph algorithm

KW - Circular walk

KW - DE-NOVO ASSEMBLER

KW - BRUIJN GRAPHS

KW - SEQUENCE

KW - PERSISTENCY

KW - ALIGNMENT

KW - GENOMES

KW - REGIONS

KW - 113 Computer and information sciences

KW - 1182 Biochemistry, cell and molecular biology

U2 - 10.1186/s13015-018-0122-7

DO - 10.1186/s13015-018-0122-7

M3 - Article

VL - 13

JO - Algorithms for Molecular Biology

JF - Algorithms for Molecular Biology

SN - 1748-7188

M1 - 3

ER -