Computational pan-genomics: status, promises and challenges

The Computational Pan-Genomics Consortium, Veli Antti Tapani Mäkinen, Serra Daniel Alejandro Valenzuela

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

Originalspråkengelska
TidskriftBriefings in Bioinformatics
Volym19
Utgåva1
Sidor (från-till)118-135
Antal sidor18
ISSN1467-5463
DOI
StatusPublicerad - jan 2018
MoE-publikationstypA1 Tidskriftsartikel-refererad

Vetenskapsgrenar

  • 1182 Biokemi, cell- och molekylärbiologi
  • 113 Data- och informationsvetenskap

Citera det här

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title = "Computational pan-genomics: status, promises and challenges",
keywords = "1182 Biochemistry, cell and molecular biology, 113 Computer and information sciences, pan-genome, sequence graph, read mapping, haplotypes, data structures, MULTIPLE SEQUENCE ALIGNMENT, BURROWS-WHEELER TRANSFORM, DE-BRUIJN GRAPHS, GENETIC-VARIATION, WIDE ASSOCIATION, VIRAL METAGENOMICS, HIGH-RESOLUTION, CANCER GENOMES, LONG READS, POPULATION",
author = "Tobias Marschall and {The Computational Pan-Genomics Consortium} and M{\"a}kinen, {Veli Antti Tapani} and Valenzuela, {Serra Daniel Alejandro}",
year = "2018",
month = "1",
doi = "10.1093/bib/bbw089",
language = "English",
volume = "19",
pages = "118--135",
journal = "Briefings in Bioinformatics",
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Computational pan-genomics : status, promises and challenges. / The Computational Pan-Genomics Consortium ; Mäkinen, Veli Antti Tapani; Valenzuela, Serra Daniel Alejandro.

I: Briefings in Bioinformatics, Vol. 19, Nr. 1, 01.2018, s. 118-135.

Forskningsoutput: TidskriftsbidragArtikelVetenskapligPeer review

TY - JOUR

T1 - Computational pan-genomics

T2 - status, promises and challenges

AU - Marschall, Tobias

AU - The Computational Pan-Genomics Consortium

AU - Mäkinen, Veli Antti Tapani

AU - Valenzuela, Serra Daniel Alejandro

PY - 2018/1

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KW - haplotypes

KW - data structures

KW - MULTIPLE SEQUENCE ALIGNMENT

KW - BURROWS-WHEELER TRANSFORM

KW - DE-BRUIJN GRAPHS

KW - GENETIC-VARIATION

KW - WIDE ASSOCIATION

KW - VIRAL METAGENOMICS

KW - HIGH-RESOLUTION

KW - CANCER GENOMES

KW - LONG READS

KW - POPULATION

U2 - 10.1093/bib/bbw089

DO - 10.1093/bib/bbw089

M3 - Article

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JO - Briefings in Bioinformatics

JF - Briefings in Bioinformatics

SN - 1467-5463

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