Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies

Linda Dieckmann; Cristiana Cruceanu; Marius Lahti-Pulkkinen; Jari Lahti; Tuomas Kvist; Hannele Laivuori; Sara Sammallahti; Pia M. Villa; Sanna Suomalainen-König; Rebecca C. Rancourt; Andreas Plagemann; Wolfgang Henrich; Johan G. Eriksson; Eero Kajantie; Sonja Entringer; Thorsten Braun; Katri Räikkönen; Elisabeth B. Binder; Darina Czamara

doi:10.1007/s00018-021-04091-3

Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies

Linda Dieckmann, Cristiana Cruceanu, Marius Lahti-Pulkkinen, Jari Lahti, Tuomas Kvist, Hannele Laivuori, Sara Sammallahti, Pia M. Villa, Sanna Suomalainen-König, Rebecca C. Rancourt, Andreas Plagemann, Wolfgang Henrich, Johan G. Eriksson, Eero Kajantie, Sonja Entringer, Thorsten Braun, Katri Räikkönen, Elisabeth B. Binder, Darina Czamara

Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

Originalspråk	engelska
Artikelnummer	115
Tidskrift	Cellular and Molecular Life Sciences
Volym	79
Nummer	2
Antal sidor	18
ISSN	1420-682X
DOI	https://doi.org/10.1007/s00018-021-04091-3
Status	Publicerad - feb. 2022
MoE-publikationstyp	A1 Tidskriftsartikel-refererad

Vetenskapsgrenar

1182 Biokemi, cell- och molekylärbiologi

Åtkomst av dokument

10.1007/s00018-021-04091-3Licens: CC BY

s00018-021-04091-3Slutlig publicerad version, 1,38 MBLicens: CC BY

Citera det här

Dieckmann, L., Cruceanu, C., Lahti-Pulkkinen, M., Lahti, J., Kvist, T., Laivuori, H., Sammallahti, S., Villa, P. M., Suomalainen-König, S., Rancourt, R. C., Plagemann, A., Henrich, W., Eriksson, J. G., Kajantie, E., Entringer, S., Braun, T., Räikkönen, K., Binder, E. B., & Czamara, D. (2022). Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies. Cellular and Molecular Life Sciences, 79(2), Artikel 115. https://doi.org/10.1007/s00018-021-04091-3

@article{c7f7fdeb24ef4e5ba01845f9053b7d02,

title = "Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies",

keywords = "Cell type estimation, DNA methylation, Human placenta, Chorionic villi, Reference-based deconvolution, Reference-free deconvolution, ANTENATAL BETAMETHASONE TREATMENT, EPIGENOME-WIDE ASSOCIATION, QUANTILE NORMALIZATION, DEVELOPMENTAL ORIGINS, SINGLE COURSE, PACKAGE, DECONVOLUTION, EPIGENETICS, SAMPLES, 1182 Biochemistry, cell and molecular biology",

author = "Linda Dieckmann and Cristiana Cruceanu and Marius Lahti-Pulkkinen and Jari Lahti and Tuomas Kvist and Hannele Laivuori and Sara Sammallahti and Villa, {Pia M.} and Sanna Suomalainen-K{\"o}nig and Rancourt, {Rebecca C.} and Andreas Plagemann and Wolfgang Henrich and Eriksson, {Johan G.} and Eero Kajantie and Sonja Entringer and Thorsten Braun and Katri R{\"a}ikk{\"o}nen and Binder, {Elisabeth B.} and Darina Czamara",

year = "2022",

month = feb,

doi = "10.1007/s00018-021-04091-3",

language = "English",

volume = "79",

journal = "Cellular and Molecular Life Sciences",

issn = "1420-682X",

publisher = "Springer Science and Business Media Deutschland GmbH",

number = "2",

}

Dieckmann, L, Cruceanu, C, Lahti-Pulkkinen, M , Lahti, J , Kvist, T , Laivuori, H, Sammallahti, S, Villa, PM , Suomalainen-König, S, Rancourt, RC, Plagemann, A, Henrich, W, Eriksson, JG , Kajantie, E, Entringer, S, Braun, T, Räikkönen, K, Binder, EB & Czamara, D 2022, 'Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies', Cellular and Molecular Life Sciences, vol. 79, nr. 2, 115. https://doi.org/10.1007/s00018-021-04091-3

TY - JOUR

T1 - Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies

AU - Dieckmann, Linda

AU - Cruceanu, Cristiana

AU - Lahti-Pulkkinen, Marius

AU - Lahti, Jari

AU - Kvist, Tuomas

AU - Laivuori, Hannele

AU - Sammallahti, Sara

AU - Villa, Pia M.

AU - Suomalainen-König, Sanna

AU - Rancourt, Rebecca C.

AU - Plagemann, Andreas

AU - Henrich, Wolfgang

AU - Eriksson, Johan G.

AU - Kajantie, Eero

AU - Entringer, Sonja

AU - Braun, Thorsten

AU - Räikkönen, Katri

AU - Binder, Elisabeth B.

AU - Czamara, Darina

PY - 2022/2

Y1 - 2022/2

KW - Cell type estimation

KW - DNA methylation

KW - Human placenta

KW - Chorionic villi

KW - Reference-based deconvolution

KW - Reference-free deconvolution

KW - ANTENATAL BETAMETHASONE TREATMENT

KW - EPIGENOME-WIDE ASSOCIATION

KW - QUANTILE NORMALIZATION

KW - DEVELOPMENTAL ORIGINS

KW - SINGLE COURSE

KW - PACKAGE

KW - DECONVOLUTION

KW - EPIGENETICS

KW - SAMPLES

KW - 1182 Biochemistry, cell and molecular biology

U2 - 10.1007/s00018-021-04091-3

DO - 10.1007/s00018-021-04091-3

M3 - Article

SN - 1420-682X

VL - 79

JO - Cellular and Molecular Life Sciences

JF - Cellular and Molecular Life Sciences

IS - 2

M1 - 115

ER -