Research output per year
Research output per year
Personal profile
Fields of Science
- 113 Computer and information sciences
- algorithm engineering
- algorithmic bioinformatics
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Cut Paths and Their Remainder Structure
Cairo, M., Khan, S., Rizzi, R., Schmidt, S. S., Tomescu, A. & Zirondelli, E. C., 4 Mar 2026, In: ACM Transactions on Algorithms. 22, 2, p. 1-30 30 p., 21.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Scalable computation of ultrabubbles in pangenomes by orienting bidirected graphs
Harviainen, J., Sena, F., Moumard, C., Politov, A., Schmidt, S. & Tomescu, A. I., Jul 2026, In: Bioinformatics. 42, 10 p., btag235.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Applying the Safe-And-Complete Framework to Practical Genome Assembly
Schmidt, S., Toivonen, S., Medvedev, P. & Tomescu, A. I., Aug 2024, 24th International Workshop on Algorithms in Bioinformatics, WABI 2024. Pissis, S. P. & Sung, W.-K. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 8. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 312).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
Open AccessFile -
Flowtigs: Safety in flow decompositions for assembly graphs
Sena, F., Ingervo, E., Khan, S., Prjibelski, A., Schmidt, S. & Tomescu, A., 20 Dec 2024, In: iScience. 27, 12, p. 111208 22 p., 111208.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Cut paths and their remainder structure, with applications
Cairo, M., Khan, S., Rizzi, R., Schmidt, S. S., Tomescu, A. & Zirondelli, E. C., 2023, 40th International Symposium on Theoretical Aspects of Computer Science, STACS 2023. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, p. 17:1-17:17 17 p. (Leibniz International Proceedings in Informatics (LIPIcs); vol. 254).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
Open AccessFile
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SCALEBIO
Tomescu, A. (Project manager), Biagi, E. (Participant), Cracco, A. (Participant), Harviainen, J. A. M. (Participant), Moumard, C. C. (Participant), Przhibelskiy, A. (Participant), Schmidt, S. S. (Participant) & Sena, F. M. (Participant)
01/09/2025 → 31/08/2030
Project: EU funding
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Enlarging the Limits of Practical Tractability for Graph Problems in Bioinformatics
Tomescu, A. (Project manager), Coroliuc, A. (Participant), Kuosmanen, R. K. (Participant), Moumard, C. C. (Participant), Politov, A. (Participant), Preoteasa, A. (Participant), Przhibelskiy, A. (Participant), Schmidt, S. S. (Participant) & Sena, F. M. (Participant)
01/01/2024 → 31/12/2026
Project: Research Council of Finland: Targeted Academy Project
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Virtaushajotelmat: algoritmeja ja bioinformatiikan sovelluksia
Tomescu, A. (Project manager), Engelhardt, A. M. B. (Participant), Grigorjew, A. (Participant), Jiamjitrak, W. (Participant), Petri, A. J. (Participant), Pfeil, R. K. (Participant), Przhibelskiy, A. (Participant), Schmidt, S. S. (Participant) & Sena, F. M. (Participant)
01/09/2022 → 31/08/2026
Project: Research Council of Finland: Academy Project
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SAFEBIO: Safe and Complete Algorithms for Bioinformatics
Khan, S. (Project manager), Schmidt, S. S. (Participant) & Ma, J. (Participant)
01/03/2020 → 28/02/2025
Project: Research project
Prizes
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Best Paper Award
Schmidt, S. S. (Recipient) & Alanko, J. (Recipient), 9 Sept 2022
Prize: Prizes and awards